Shape Analysis Software SCI Institute, University of Utah

Welcome to the website for the Computational Anatomy group at the Scientific Computing and Imaging (SCI) Institute, University of Utah.

Software

We have developed a collection of open-source software, hosted on bitbucket, implementing many of the algorithms we have published in our papers. Most of these projects make use of the PyCA python library, which implements many basic image analysis operations, including warping via interpolation, file IO for all ITK-supported filetypes, and basic plotting using matplotlib.

Resources

• PyCA wiki
• PyCA programming tutorial
• Bitbucket page: a listing of released softare projects
• PyCA: Python for Computational Anatomy, our primary development library
• PyCAHusk: download PyCA along with all our projects at once